Some of these wires will be split and go to several different destinations, ie the blinker/turn signal wire will split (somewhere) and feed the front blinker, rear blinker and cluster blinker light, so you'll read 00 at various different locations. Likewise, pin 4 on the wiper motor, is fed from fuse 2, so this will be common to the wire that should terminate at pin 6 on the connector, so you are going to get some misleading readings
If you concentrate on the wires that have a single destination first, ie wire from pin 1 to the washer pump, once confirmed tick that one off. Wire from pin 2 to wiper relay pin 56, tick that one off. Should mention that all relays or connectors should be unplugged, or else you'll read through relay coils or lamp filaments and this will give a false reading
Unfortunately, because your loom colours don't match the male connector, and the original MB colours, all of the wires on fuse 1 and 2 will need to be unsoldered, or else you'll get a reading on any of these common wires whatever they feed, unless you can match a wire colour, but it looks like you have several of one colour, madness of whoever did this to your wiring
Many ohmeters have a 200 ohm scale, that's what i would use, but i can't see that on your meter, unless it's the symbol next to the 2K, what do the instructions say? 2K is ok, but not as accurate as 200 ohms when measuring for continuity
Carry on, i'm sure you'll get there, just need to be very methodical, and make exact notes, ie colour of the wire, pin number at connector and pin number at destination, or else you'll just confuse yourself